DAMIANI, CHIARA
DAMIANI, CHIARA
DIPARTIMENTO DI BIOTECNOLOGIE E BIOSCIENZE
Characterizing Cellular Metabolism via Flux Enrichment Scores: A Versatile Framework for Bulk, Single-Cell, and Spatial Transcriptomics
2026 Lapi, F; Maspero, D; Marteletto, G; Lin, L; Galuzzi, B; Pascual-Reguant, A; Damiani, C
COBRAxy: Constraint-Based and Multi-Omics Metabolic Analysis in Galaxy
2026 Lapi, F; Milazzo, L; Turati, M; Galuzzi, B; Vanoni, M; Damiani, C
COBRAxy: constraint-based metabolic modeling in Galaxy
2026 Lapi, F; Milazzo, L; Lin, L; Rizzo, I; Galuzzi, B; Damiani, C
Constraint-based informed Machine Learning links non-canonical TCA cycle activity to Warburg metabolism and hallmarks of malignancy
2026 Lin, L; Lapi, F; Galuzzi, G; Vanoni, M; Alberghina, L; Damiani, C
FGFR3 oncogenic activation drives oxidative metabolic reprogramming in bladder cancer: a systems metabolomics approach
2026 Ducci, G; Ciufolini, G; Campioni, G; Pasquale, V; Gigliotti, G; Ponzetto, S; Benedetti, D; Galuzzi, B; D’Aliberti, D; Spinelli, S; Satasiya, V; Ventura, E; Raggi, C; Vago, R; Bonanomi, M; Gaglio, D; Giordano, A; Morrione, A; Damiani, C; Piazza, R; Cicero, D; Vanoni, M; Petrella, G; Sacco, E
Open questions on transcriptionally informed constraint-basedmodelling
2026 Galuzzi, B; Lapi, F; Damiani, C
Predicting Metalloprotein Redox Potentials with Machine Learning: A Focus on Iron–Sulfur Systems
2026 Persico, F; Galuzzi, B; Pellegrino, M; Claudel, A; De Gioia, L; Nastri, F; Gilardi, G; Damiani, C; Valetti, F; Chino, M; Arrigoni, F
Spatial FBA reveals heterogeneous Warburg niches in renal tumors and lactate consumption in colorectal cancer
2026 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual-Reguant, A; Damiani, C
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking
2026 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
Spatial Flux Balance analysis reveals Warburg heterogeneity in renal tumors and lactate-consuming niches in colorectal cancer
2026 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
A Non-Canonical Tricarboxylic Acid Cycle Underlying Cellular Identity: An In Silico Perspective
2025 Lin, L; Saputo, F; Lapi, F; Isabella, R; Galuzzi, B; Vanoni, M; Damiani, C
Identifying Damage-Related Features in scRNA-seq Data
2025 Marteletto, G; Galuzzi, B; Damiani, C
Mechanistically informed machine learning links non-canonical TCA cycle activity to Warburg metabolism and hallmarks of malignancy
2025 Lin, L; Lapi, F; Galuzzi, B; Vanoni, M; Alberghina, L; Damiani, C
Multi-omics data analysis to characterize metabolic shifts during embryo development | BtBsDay2025
2025 Lapi, F; Milazzo, L; Galuzzi, B; Bertelli, F; Martello, G; Damiani, C
Multimodal analysis of tissue resident dendritic cells reveals the immunosuppressive role of DCs type 3 in human NSCLC and a mouse lung tumor model
2025 Rocca, G; Celant, A; Sonechkina, M; Stucchi, G; Galli, M; Cozzi, S; Marongiu, L; Marcandalli, E; Lapi, F; Donato, A; Protti, G; Damiani, C; Innocenti, M; Granucci, F
Predicting Metalloprotein Redox Potentials with Machine Learning: A Focus on Iron–Sulfur Systems
2025 Persico, F; Galuzzi, B; Pellegrino, M; Claudel, A; De Gioia, L; Nastri, F; Gilardi, G; Damiani, C; Valetti, F; Chino, M; Arrigoni, F
Single-cell analysis reveals distinct differentiation trajectories and immunoregulatory roles of DC3 subsets in NSCLC
2025 Sonechkina, M; Rocca, G; Lapi, F; Celant, A; Marcandalli, E; Galli, M; Cozzi, S; Stucchi, G; Marongiu, L; Donato, A; Protti, G; Innocenti, M; Damiani, C; Granucci, F
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking
2025 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
Spatial Flux Balance Analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking
2025 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
Adjusting for false discoveries in constraint-based differential metabolic flux analysis
2024 Galuzzi, B; Milazzo, L; Damiani, C