Bicocca Open Archive

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BONATI, LAURA
 Distribuzione geografica
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Continente #
NA - Nord America 10.256
AS - Asia 6.102
EU - Europa 4.890
SA - Sud America 796
AF - Africa 148
OC - Oceania 13
Continente sconosciuto - Info sul continente non disponibili 6
Totale 22.211
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Nazione #
US - Stati Uniti d'America 9.811
SG - Singapore 2.094
CN - Cina 1.346
IT - Italia 1.069
DE - Germania 911
VN - Vietnam 775
HK - Hong Kong 731
RU - Federazione Russa 663
BR - Brasile 605
SE - Svezia 515
IE - Irlanda 384
CA - Canada 367
UA - Ucraina 343
GB - Regno Unito 252
IN - India 244
FR - Francia 234
ID - Indonesia 162
FI - Finlandia 136
KR - Corea 120
BD - Bangladesh 89
AR - Argentina 83
TR - Turchia 79
PL - Polonia 70
IQ - Iraq 58
ES - Italia 53
PH - Filippine 53
ZA - Sudafrica 53
NL - Olanda 51
JP - Giappone 48
MX - Messico 48
TH - Thailandia 48
MY - Malesia 44
PK - Pakistan 43
AT - Austria 38
DK - Danimarca 36
SA - Arabia Saudita 33
BE - Belgio 28
EC - Ecuador 27
CH - Svizzera 24
CO - Colombia 23
MA - Marocco 19
TN - Tunisia 19
UZ - Uzbekistan 19
VE - Venezuela 17
CL - Cile 16
AE - Emirati Arabi Uniti 14
IR - Iran 13
ET - Etiopia 12
PT - Portogallo 12
PY - Paraguay 12
IL - Israele 11
JO - Giordania 11
NP - Nepal 11
AU - Australia 10
JM - Giamaica 10
KE - Kenya 10
EG - Egitto 9
HU - Ungheria 9
CZ - Repubblica Ceca 8
AZ - Azerbaigian 7
LK - Sri Lanka 7
PE - Perù 7
RO - Romania 7
DZ - Algeria 6
GR - Grecia 6
KZ - Kazakistan 6
LT - Lituania 6
TW - Taiwan 6
BG - Bulgaria 5
EU - Europa 5
MN - Mongolia 5
UY - Uruguay 5
CR - Costa Rica 4
HN - Honduras 4
HR - Croazia 4
NO - Norvegia 4
OM - Oman 4
PS - Palestinian Territory 4
RS - Serbia 4
AL - Albania 3
NG - Nigeria 3
NZ - Nuova Zelanda 3
SK - Slovacchia (Repubblica Slovacca) 3
SY - Repubblica araba siriana 3
AM - Armenia 2
BB - Barbados 2
BH - Bahrain 2
BY - Bielorussia 2
DO - Repubblica Dominicana 2
GT - Guatemala 2
KG - Kirghizistan 2
KW - Kuwait 2
LU - Lussemburgo 2
MD - Moldavia 2
ML - Mali 2
MU - Mauritius 2
NI - Nicaragua 2
PA - Panama 2
SC - Seychelles 2
SI - Slovenia 2
Totale 22.186
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Città #
Ann Arbor 1.537
Singapore 1.236
Ashburn 796
Hong Kong 709
Woodbridge 638
Chandler 606
Fairfield 594
San Jose 513
Frankfurt am Main 509
Houston 468
Milan 396
Dublin 368
Wilmington 365
Jacksonville 354
Beijing 243
Dearborn 243
New York 236
Seattle 231
Santa Clara 230
Ho Chi Minh City 207
Cambridge 206
Toronto 197
Los Angeles 171
Shanghai 168
Princeton 165
Hanoi 158
Chicago 142
Jakarta 129
Dallas 125
Hefei 125
The Dalles 120
Nanjing 116
Seoul 97
Dong Ket 78
Moscow 77
Council Bluffs 75
Lauterbourg 73
Buffalo 65
São Paulo 64
Lachine 59
Helsinki 58
Munich 58
Altamura 54
Lawrence 52
Orem 42
San Diego 42
Bangkok 41
Ottawa 41
Warsaw 32
Andover 31
Boardman 31
Da Nang 31
Denver 30
Tianjin 30
Tokyo 30
Manila 29
Guangzhou 28
Johannesburg 28
Kraków 27
Shenyang 27
Vienna 27
Baghdad 26
Brooklyn 26
Brussels 26
Kuala Selangor 26
Pune 26
Edmonton 24
Haiphong 24
Nanchang 24
Falls Church 23
Fremont 23
London 23
Rio de Janeiro 23
Atlanta 21
Changsha 21
Hebei 21
Rome 21
Stockholm 21
Manchester 20
Bologna 19
Chennai 19
Jinan 19
Phoenix 19
Gavirate 18
Montreal 18
Tashkent 18
Amsterdam 17
Bari 17
Biên Hòa 17
Jeddah 17
Jiaxing 17
Lahore 17
Mountain View 17
Poplar 16
Huizen 15
San Francisco 15
Grafing 14
Norwalk 14
Nuremberg 14
Nürnberg 14
Totale 14.428
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Nome #
Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms 543
Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods 478
Modeling the binding of diverse ligands within the Ah receptor ligand binding domain 455
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by self-organising map analysis of their molecular dynamics 428
Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics 426
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches 406
Role of dynamics in ligand-protein interactions: modelling of binding to the pregnane x receptor 374
Docking to homology models highlights the molecular determinants of ligand binding to the AhR 360
Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning 332
NURA: A curated dataset of nuclear receptor modulators 330
No dance, no partner! A tale of receptor flexibility in docking and virtual screening 319
A selected bibliography on PCDD and PCDF formation 295
Complementarietà di metodi di modellistica molecolare e di bioinformatica strutturale nello studio di struttura e funzione di proteine 290
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein 286
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands 282
Self organizing maps to efficiently cluster and functionally interpret protein conformational ensembles 278
A Neural Network Approach for the Identification of Pathways in Molecular Dynamics Simulations of Ligand Binding 270
Chemometric approaches in environmental problems concerning PCDD and PCDF. Data interpretation and source correlation. Mechanisms of formation and destruction in MSW combustion process. 262
Comparative in vitro and in silico analysis of the selectivity of indirubin as a human ah receptor agonist 259
Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles 257
Computational approaches to shed light on molecular mechanisms in biological processes 257
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps 255
ZADDOCK: incorporating ab initio search into HADDOCK 255
Ligand binding and activation of the Ah receptor 254
Structural modeling of the AhR:ARNT complex in the bHLH–PASA–PASB region elucidates the key determinants of dimerization 253
Study of ligand binding to HIF-2α through Path-Metadynamics 252
Detecting similarities among distant homologous proteins by comparison of domain flexibilities 251
AHR Ligands: Promiscuity in Binding and Diversity in Response 251
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 1 PCDD and PCDF in MSW 251
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 2 PCDD and PCDF in Stack Gases 250
Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry 249
In vitro toxicity and in silico docking analysis of two novel selective AH-receptor modulators 249
Mechanism of a nanodevice binding to its target protein by atomistic molecular dynamics: the case of RGD-conjugated PEGylated TiO2 nanoparticles binding to integrins αVβ3 247
Structural and Functional Characterization of the Aryl Hydrocarbon Receptor Ligand Binding Domain by Homology Modeling and Mutational Analysis 246
PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations 245
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals 242
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation 240
Ligand docking in AhR homology model: specificity of structurally diverse ligands interactions 240
The toxicity equivalency factor scheme applied to municipal incinerator PCDD/PCDF emissions when specific congener information is lacking 239
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2,3,7,8-tetrachlorodibenzo -p -dioxin 234
Toward a mechanistic understanding of PCDD biological activity based on molecular electrostatic potential modeling 232
Functional annotation of protein conformations by Self-Organizing Maps 232
Conservation and specialization in PAS domain dynamics 231
Predicting the accuracy of protein-ligand docking on homology models 230
On the choice of the perturbed state for PMO prediction of selectivities in cycloaddition reactions 230
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis 228
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability 228
Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Nonfunctional Receptor 228
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 227
Predicting the accuracy of protein-ligand docking on homology models 226
On the role of the molecular electrostatic potential in modelling the activity of non peptide angiotensin II receptor antagonists 224
Evidence that ligand binding is a key determinant of Ah receptor-mediated transcriptional activity 223
The combustion of municipal solid wastes: PCDD and PCDF in MSW in emissions. A chemometric approach. 222
A new methodology for the comparison of protein dynamics based on self-organizing maps 219
Unraveling PPI hot spots for PAS domains dimerization: the case of Aryl hydrocarbon Receptor 219
Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process 219
Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin 218
Mechanism of Ligand-Activated Nanoparticles Binding to Target Cell-Surface Receptors by All-Atom Molecular Dynamics 217
Functional interpretation of protein conformational ensembles using self-organizing maps and network components 217
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis 216
Self-organizing maps of unbiased ligand-target binding pathways and kinetics 214
Extension of a PMO model to study the regioselectivity in 1,3 dipolar cycloadditions: reactions of 3,5 dichloro 2,4,6 trimethyl benzonitrile oxide with heteroaromatic systems 211
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database 209
Molecular electrostatic potentials of substituted aromatic compounds: factors affecting the differences between ab initio and semiempirical results 209
A comparative analysis of molecular electrostatic potentials of chlorinated dibenzo p dioxins in relation to their biological activity 209
Binding specificity of diverse AhR ligands interpreted by Molecular Modeling 208
Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks 206
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain 201
Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form 201
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 200
Defining the limits of homology modeling in information-driven protein docking 195
Estimation of the toxicity equivalents of PCDD/PCDF mixtures when specific congener information is lacking: a preliminary study 194
Structural and Functional Characterization of PAS Domain Dimers: the Aryl Hydrocarbon Receptor Paradigm 191
BioPySDS: an Object-Oriented Interface to Manage Protein Dynamics in an Evolutionary Framework 190
An Aryl Hydrocarbon Receptor Sequence from the Caecilian Gymnopis multiplicata Exhibits Low Responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin 190
Modeling of Ligand Binding to the HIF-2α Protein with Enhanced Sampling Methods 189
The cellular and molecular determinants of naphthoquinone-dependent activation of the aryl hydrocarbon receptor 185
Structural characterization of insect trehalase and assessment of potential inhibitors 179
Modelling ligands/Aryl hydrocarbon Receptor binding interactions 177
Testing structure-binding predictions from comparative modeling of the AHR ligand-binding domain: Studies with zebrafish AHR1a 177
Unraveling Dimerization Interfaces of PAS Domain Dimers: Lessons from the AhR/ARNT Complex. 177
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations 173
Conformational selection and induced fit roles in ensemble docking applications 173
Deciphering the ahr:arnt dimerization process: how to assembly the functional puzzle of interacting interfaces 173
The AhR Signaling Mechanism: A Structural Point of View 173
An aryl hydrocarbon receptor from the caecilian Gymnopis multiplicata suggests low dioxin affinity in the ancestor of all three amphibian orders 172
Selezione di riferimenti bibliografici relativi alla formazione di PCDD e PCDF 170
TCDD-Induced Allosteric Perturbation of the AhR:ARNT Binding to DNA 169
Intermolecular interactions that determine the regioselectivity in 1,3‐dipolar cycloadditions of N‐methyl‐1,3‐oxazolium‐5‐olates with N‐(phenylmethylene)benzenesulphonamide 169
La combustione dei rifiuti solidi urbani e le emissioni di PCDD e PCDF 157
Unveiling the inhibition mechanism of HIF-2α:ARNT dimerization by protein dynamics investigation 157
Modelling the intertwined network of ppis along the ahr:arnt dimer 147
Aryl Hydrocarbon Receptor-Dependent and-Independent Pathways Mediate Curcumin Anti-Aging Effects 145
Specific amino acid residues within the ligand binding domain confer low responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to an aryl hydrocarbon receptor (AHR) from the frog Xenopus Laevis 132
SOMMD: an R package for the analysis of molecular dynamics simulations using self-organizing map 122
Totale 22.720
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Categoria #
all - tutte 69.762
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 69.762
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2020/2021326 0 0 0 0 0 0 0 0 0 0 100 226
2021/20221.127 80 147 149 82 34 88 65 27 58 89 111 197
2022/20232.285 208 624 242 215 179 347 29 138 164 15 59 65
2023/20241.556 74 75 74 98 179 362 294 68 97 25 39 171
2024/20253.283 196 356 179 196 256 203 157 214 257 444 271 554
2025/20267.615 743 447 565 939 1.135 387 1.199 368 793 672 367 0
Totale 22.720